{
    "inputs": {
        "reads": {
            "path": "reads.fastq"
        },
        "stages": [
            {
                "algos": [
                    {
                        "algo": "map1",
                        "minSeqLen": 20
                    },
                    {
                        "algo": "map2",
                        "minSeqLen": 20
                    }
                ],
                "stageId": 1
            },
            {
                "algos": [
                    {
                        "minSeqLen": 10,
                        "maxSeqLen": 20,
                        "seedLength": 16,
                        "algo": "map1"
                    },
                    {
                        "maxSeedHits": -1,
                        "minSeqLen": 10,
                        "maxSeqLen": 20,
                        "algo": "map2"
                    }
                ],
                "stageId": 2
            }
        ]
    }
}